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The WFSU Ecology Blog
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Secrets of the Seep: A Voyage into the Mysteries of Ocean Carbon

by Rob Diaz de Villegas April 15, 2025

Secrets of the Seep is the latest WFSU Ecology documentary. Watch it on Thursday, May 8 at 8 pm/ 7 Central on WFSU-TV and online.

Here’s a short preview:

Harsh waves. Rugged terrain. A seasick crew. A school of disruptive fish.

The ocean bottom is a challenging place to study. People who conduct research here like to say that we know more about space than we do about the deep ocean; it is the most mysterious place on earth. And yet, much of what happens down there has consequences for the rest of the planet.

In Secrets of the Seep, we meet an international team of researchers working to solve one of these mysteries of the deep. Dissolved organic carbon (DOC) is a little-understood substance, and yet it forms the ocean’s largest carbon reservoir. The world’s largest source of organic carbon is methane contained in the sediments beneath the ocean. Where methane seeps into the water column, DOC is much older than in the rest of the ocean – but why?

Learning the answer would help explain what keeps this massive amount of carbon cycling through the world’s oceans, and mostly out of our atmosphere.

WFSU joined the research team as they set out to answer this question in August of 2023. They found the ocean uncooperative. Weather kept them from using their most sophisticated research tool: Alvin, a world famous manned submersible. Alvin’s résumé includes a trio of impressive discoveries: hydrothermal vents, methane seeps, and the wreckage of the Titanic.

After years of planning, they found they could not work at the site they had carefully chosen. How did they respond?

Secrets of the Seep is about the work that goes into researching the ocean bottom. Scientists spend years planning for those precious few days they have at sea. How can they overcome the challenges of an uncooperative environment to answer their scientific questions?

Divers secure the Alvin as it emerges after a dive.
Divers secure the Alvin as it emerges after a dive.
A methane seep off the coast of Oregon. Image courtesy Woods Hole Oceanographic Institution.
A methane seep off the coast of Oregon. Image courtesy Woods Hole Oceanographic Institution.
The SeepDOM crew slices a sediment core taken from a methane seep on the deck of the Research Vessel Atlantis.
The SeepDOM crew slices a sediment core taken from a methane seep on the deck of the Research Vessel Atlantis.

23 Researchers, 1 Research Question (with many spinoffs)

Understanding the mechanics of the global ocean carbon cycle is no small task. This project, titled SeepDOM by the team, is a collaboration between research institutions from all over the world. They include:

  • Florida State University
  • Geomar Helmholtz Center for Ocean Research
  • MARUM – Center for Marine Environmental Sciences at the University of Bremen
  • University of Maryland Center for Environmental Science
  • University of Tennessee
  • US Geological Survey
  • Woods Hole Oceanographic Institution

The institutions in bold are those of the Principal Investigators. The PIs are trying to answer the main scientific question: why is dissolved organic carbon older near methane seeps than in other parts of the ocean? And what role does that play in the global carbon cycle?

The other institutions sent PhDs and graduate students to support their primary objective. But they also have their own research related to ocean sediments, microbes, and carbon.

The team is a mix of PhDs, graduate students, technicians and undergraduate students. They worked in shifts around the clock, the entire time they were out at sea. Some of their tasks were highly technical, while others were manual. One minute they might have been in the computer lab controlling equipment hundreds of meters beneath the surface of the ocean, and the next they might have been on the deck in hardhats, pulling on chains to retrieve their gear from the water. And then there was all the mud squeezing. A lucky few went down in the Alvin.

The research team set up a lab on the Research Vessel Atlantis. Multiple stations processed samples of mud, gas, and water.
The research team set up a lab on the Research Vessel Atlantis. Multiple stations processed samples of mud, gas, and water. Each researcher tackled a different aspect of their scientific question.
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iNaturalist

iNaturalist became a part of the WFSU Ecology Blog during the EcoCitizen Project in 2019.  Since then, we’ve used it to help identify the many plants and animals we see on our shoots.  And on the Backyard Blog, we show how it can be used to identify weeds and garden insects, to help figure out what’s beneficial or a possible pest.  Below is the iNaturalist profile belonging to WFSU Ecology producer Rob Diaz de Villegas.

iNaturalist


View robdv’s observations »

Most Recent

  • Apalachicola Bay Living Shoreline: Phase 1
  • Fireflies of Florida | Coast to Canopy Episode 4
  • Life on the Ocean Floor, and Why It’s a Hard Place to Explore | Coast to Canopy Episode 3
  • Methane and Microbes at the Ocean Floor | The Science of Secrets of the Seep
  • A History of Fire in Tree Rings | Coast to Canopy Episode 2

These baby raccoons know where to go to get photographed and filmed: the wooded area next to the WFSU studios, of course. Photo by Lydell Rawls, WFSU Public Media.

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The WFSU Ecology Blog
  • Home
    • About the WFSU Ecology Blog
    • EcoAdventures
      • Kayak and Canoe Adventures
      • Hiking
      • Wildlife Watching
    • Observations From the Field
      • White Pelicans Visit Dr. Charles L. Evans Pond in Tallahassee
      • An April Walk at Ochlockonee River WMA
      • Nesting Raptors at Honeymoon Island State Park
    • WFSU Public Media Home
  • Documentaries
    • Secrets of the Seep: A Voyage into the Mysteries of Ocean Carbon
    • Finding the First Floridians: Underwater Archeologists Uncover Florida’s Prehistory
    • In Their Words: Black Legacy Communities in North Florida
    • EcoCitizen Show | Seasons in South Tallahassee
    • Red Wolf Family Celebrates First Year at the Tallahassee Museum
    • Roaming the Red Hills
    • Oyster Doctors
    • Testing the Ecology of Fear
    • EcoShakespeare
    • Stories from the Apalachicola
    • Classic WFSU Ecology Documentaries
  • Habitats
    • Estuaries
      • Oyster Reef
        • The Effects of Predators and Fear on Oyster Reefs
        • Apalachicola Oyster Research
        • Animal Species in a North Florida Intertidal Oyster Reef
        • Oyster Reef Ecology | On the Reef
      • Salt Marsh
        • In the Grass- Salt Marsh Biodiversity Study
        • Plants and Animals of a North Florida Salt Marsh
        • Salt Marsh Ecology | In the Grass
      • Seagrass Bed
        • Predatory Snails, and Prey, of the Bay Mouth Bar Seagrass Beds
      • In the Grass, On the Reef Glossary
    • Waterways Big and Small
      • Aucilla/ Wacissa Watershed
      • Apalachicola Basin
        • Apalachicola Bluffs and Ravines | Virtual Field Trip
        • The Age of Nature Screening & Discussion | The Future of the Apalachicola
        • Apalachicola River and Bay
        • Apalachicola RiverTrek | Kayaking, Camping, & Hiking the River Basin
    • Longleaf Pine & Fire Ecology
  • Backyard Habitat
    • Backyard Blog
      • My Year in Bugs: the 2022 Backyard Blog
      • Backyard Ecology Blog | 2021
      • Backyard Blog November/ December 2020
      • Backyard Blog September/ October 2020
      • July and August 2020 Backyard Blog
      • Backyard Blog June 2020
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    • Backyard Flora and Fauna
      • Bees of North Florida and South Georgia
      • Wasps of North Florida: The Bad, the Ugly, and the (yes, really) Good
      • The Seasonality of Bees (and Bee Plants) in North Florida
      • Woody Vines of North Florida
      • Flies of North Florida are More Diverse than You’d Think
      • The Case for Weeds, Our Unsung Florida Native Plants
      • Devil’s Walkingstick: Your New Favorite Thorny Pollinator Plant?
      • Florida Native Milkweed | Tips for Growing Your Monarch Friendly Garden
      • Mistletoe | A Parasite for the Holidays (But Maybe We Like it Anyway?)
    • Florida Friendly Seasonal Planting Guide
    • Pollinator and Gardening Posts
    • Gardening Web Resources