I’ve come to Saint Augustine to get the last of the footage I need to finish the In the Grass, On the Reef documentary, and we’ve come a long way from where we started from on this blog. One year ago today, this site went live and Randall and David introduced you to their research. The oyster study had just gotten its grant from NSF and we went out with David as he walked out into Alligator Harbor in search of study sites. It was a slow, messy day- but a necessary first step. Continue reading →
The answer to this seemingly rhetorical question was the subject of a recent review by Edward Barbier and colleagues in the journal Ecological Monographs. They focused not only on salt marshes, but also coral reefs, seagrass beds, mangroves, and sand beaches / dunes. The impetus for the analysis was the recognition that many coastal habitats are in decline – for instance, 50% of salt marshes are lost or degraded around the world – and the belief that we need a better understanding of the true costs of these losses. Continue reading →
A little over a year ago, when the FSU Coastal & Marine Laboratory and WFSU-TV – a TV station – started this online enterprise, the understanding was that at some point this would end up being a show. And so here we are. As you may have gathered from that video up there, this will be about predators and prey: who’s eating whom, and who’s scaring whom. We will of course be doing this through the prism of David and Randall’s studies: the consumptive and non-consumptive effects of predators in salt marshes and oyster reefs, and the methods used to shine a light on these interactions. Continue reading →
One of the most fascinating aspects of the field of science is the unpredictable patterns and directions that certain communities can take over a period of time. Whether the change in a habitat occurs due a spontaneous event such as a devastating hurricane or a longer, more gradual event such as climate change; it is important to understand the impacts these changes may have on the resident organisms as well as the future of the community. Studying how organisms respond to each other and their environment are key principles of ecology.
As David mentioned in the previous post, I have recently begun my graduate student work in St. Augustine, where I hope to gain a better understanding of the unique observations we have made while working in the area for the NSF oyster project.
Other than being the nation’s oldest city, St. Augustine is a very dynamic place. From condominiums and restaurants to historic landmarks and beautiful beaches; the area is flooded with snow-birds during this time of year. More notably, St. Augustine has countless state parks, wildlife preserves, and protected habitats; which allow for not only attractions for tourists but areas of research for scientists and most importantly, shelter and nurseries for the resident wildlife. Continue reading →
Scanning the photo, you can see crown conchs crawling about this Saint Augustine reef. Crown conchs are a normal sight on Florida reefs, but not to the extent seen here. David has tasked Hanna Garland with looking into this very localized phenomenon and its relationship with increasing reef failures.
Dr. David KimbroFSU Coastal & Marine Lab
Last week I detailed a recent trip to St. Augustine, ending the post with a mention of a side project being embarked upon by my lab there. Throughout the past year, we’ve noticed that our St. Augustine study site was loaded with tons of crown conchs. Although crown conchs are ubiquitous in Florida, they are abnormally abundant on our St. Augustine reefs and our St. Augustine reefs are mostly dead. All our other sites have relatively healthy looking oyster reefs and few crown conchs.
But a few miles north of our monitoring reefs, we find absolutely no crown conchs and the health of the oysters is great. Because crown conchs, as has been shown by the research of our very own Doc Herrnkind, love eating oysters, it’s easy to conclude that crown conchs have mowed down all the oysters on our monitoring reefs. But why are they restricted only to our monitoring reefs? Is there a predator of conchs present north of reefs but that is absent on our monitoring reefs? Perhaps the environment has changed in a way that killed all of the oysters and the crown conchs are just cleaning up the mess.
Proboscis out (protruding from the bottom of the snail), a crown conch heads towards a clump of oysters. The conch will use its proboscis to pry open the oyster shell and suck out the meat.
Luckily, Hanna has agreed to enter my lab as a graduate student to tackle this research project. So, she spent a number of days collecting coarse-scale data on the spatial extent of this conch-oyster pattern, consulting with locals about when this pattern developed, and talking with an oceanographer about how to learn whether and how the physical environment has lead to this pattern. In a forthcoming post, I’ll let Hanna fill you in on the details of this new project, which we will be implementing quickly. This is really important to the local community because our monitoring reefs and the conch infested area used to be the most productive area in St. Augustine for harvesting oysters and rearing clams. But now, aquaculture leases here have been abandoned and a very large population of crown conchs appears to have taken up residence.
Stay tuned for Hanna’s post later this week, she’ll go into a little more detail on what we’re doing.
David’s research is funded by the National Science Foundation.
On Wednesday, June 29 at 7:30 PM/ET, WFSU-TV premieres the In the Grass, On the Reef full length documentary. David and Randall guide us through the world of coastal predators (like crown conchs). Top predators maintain important ecosystems like salt marshes and oyster reefs- but the manner in which they do this may not be confined to eating prey. Tune in to find out more!
Where did my winter of catching up on work go? And why is spring quickly hurtling into summer? YIKES!
…Okay, I feel better. All of us here feel a little behind on things, because this past winter and spring have been full of other projects (in addition to the oyster one) such as investigating how the oil spill affected marshes throughout the west coast of Florida and examining what all of those snails are up to out on Bay Mouth Bar. But now that summer is almost upon us, it’s time to move all hands on deck back towards the ambitious summer oyster goals.
Environmental vs. Predator Effects.
To lay the ground work for this summer’s oyster research, I spent a few days in St. Augustine, Florida, which is where we will conduct our colossal field experiment. As a recap of the oyster objectives, we spent year 1 monitoring the oyster food web at 12 estuaries between Florida to North Carolina. Well, we found some cool patterns regarding the food web and water-filtration/ nutrient cycling services on oyster reefs (see the 2010 wrap-up). So, now we want to know what’s causing those patterns. Are differences in oyster reefs between NC to FL due purely to differences in water temperature, salinity, or food for oysters (phytoplankton)? Or, do we have a higher diversity of predators down south that are exerting more “top-down” pressure on the southern reefs? Or, is it a combination of the environment and predators? Continue reading →
If you’re a regular reader of the blog, you’ll realize that we often talk about similar research questions or ideas in the context of different projects. As David mentioned in his description of the Baymouth Bar project, this overlap is usually intentional: as ecologists, we’re interested not only in the specific habitats that we study, but also in the underlying factors that affect these habitats and the valuable services that they provide to we humans.
It may appear at times that we’ve been covering a diverse array of topics, and while this is true, all of these topics are interconnected- a web of topics centered around a couple of central themes. The diagram below is the map that shows where every post-topic fits into these central themes. Even the artists, writers, and photographers we occasionally feature have their place amongst ecological processes like sedimentation and the non-consumptive effects of predators. Every post from here on out will have one of these icons on it- if you don’t know what the icon means, just click on it and you’ll be back at this figure with an explanation:
Michael Harrell is a local artist, brought to WFSU-TV’s attention by one of our viewers. Michael paints in both oils and watercolors and among his nautical themes are depictions of the oystermen of Florida and South Carolina. This video looks at that series of paintings. The thing that I found so beautiful about his work is his ability to capture a sense of time with his portrayal of light. You can find additional information about the artist at MichaelHarrellArt.com.
Our local oystermen, as you see in this video, typically harvest subtidal oyster reefs like those in the Apalachicola Bay. Michael Harrell also shows South Carolina oystermen harvesting intertidal reefs like those covered in this blog (i.e. Alligator Harbor). The South Carolina sites of the biogeographic oyster study are sampled by Jeb Byers’ group.
David's collaborators, from left to right- Dr. Jeb Byers, Dr. Mike Piehler, Dr. Jon Grabowski, and Dr. Randall Hughes.
As you can see from the video that summarized our efforts over 2010, it was a busy 6 months of research. After taking a great break during the holidays, the entire oyster team (Jon = Gulf of Maine Research Institute, Mike = University of North Carolina at Chapel Hill, Jeb = University of Georgia, Randall = Florida State University and me) met for a long weekend to figure out what we accomplished and where we are going in the future.
You might think that our 2011 research plans should already be set given that we received funding. Well, we did receive funding to carry out some outlandish field experiments in 2011, but these experiments were dreamed up in our offices and may not address the most ecologically relevant questions for our system. Checking in with the monitoring data is probably the best way to determine if our planned experiments were on target or if they needed to be adjusted and hopefully simplified!
Prior to the oyster summit last weekend, I hounded all of the research teams for all of their data. Given the huge volume of data and everyone’s busy schedules with teaching classes and other research projects, this was quite the task. Once Tanya meshed all the data together (also not a simple task), I then moved on to the next task of analyzing our data.
Well, the initial excitement quickly turned into a stomach churning feeling of….where the heck do I begin? Similar to the way that too many prey can reduce the effectiveness of predators, the data were swamping me…I was overwhelmed and the draining hourglass wasn’t helping (people were flying into town in two days…yikes!).
After multiple cups of coffee, the anxiety passed and I decided to revisit some basic questions:
David's team used gill nets to catch the larger fish around the reefs, many of which are top predators in that habitat.
(1) With the gill nets, we obtained predatory fish data. So how do the abundance and biomass of these fishes vary across latitude? And does this pattern change with season (i.e., summer versus fall)?
(2) Then I thought back to the fond memories of ripping up oyster habitat to check out the abundance of things that consume oysters (e.g., mud crabs). Oh…the memory of that work gives me a warm and fuzzy feeling; I bet Tanya, Hanna, Linda and everyone else that helped feel the same way! How do the abundances of these things change across latitude? Are there larger crabs up north or down south? How does the mud crab picture mesh with the predatory fish picture?
This spat stick is made of calcium carbonate, the same substance as oyster shell, and is ridged to simulate the ridges in those shells. That makes it an attractive landing spot for oyster spat (larval oysters), which tend to settle on oyster shells.
(3) Working our way down the food web and sticking with the oyster samples we ripped up back in August, how do oyster densities and oyster size change across latitude and how do these patterns mesh with the mudcrab and predatory fish data?
(4) Finally, I wanted to revisit the data from our instrumentation to see how temperature and salinity changed across latitude and with season, as well as the data from our spat sticks to see how oyster recruitment differed.
It’s pretty amazing that six months of work can be summarized so quickly into four topics. Well, I kept hitting the coffee and got all of these data worked up in time for the first portion of our oyster summit. Surprisingly, all inbound flights arrived on time and we all assembled last Friday to go over the data. I’ll briefly lift the research curtain to illustrate what our data looked like:
The Georgia reef gill nets trapped a lot of sharks. Here Dr. Jeb Byers is removing blue crabs (also an oyster reef predator) from shark bellies. The trapping done on these reefs is clarifying the food web for these habitats.
(1) Although we predicted predator abundance to increase at lower latitudes, predator abundance and the number of different predators peaked in Georgia/South Carolina. This is because lots of the species we have in Florida were also in Georgia. And, Georgia has lots of sharks! Needless to say, Jeb’s crew has been the busiest during gillnet sampling. Jon and Mike’s crew have had it pretty easy (no offense)! The workload reduced for everyone in the fall, but the differences across latitude stayed relatively the same. The really cool result was the pattern that hardhead catfish are extremely important and the most abundant predatory fish on Florida reefs; I love those slimy things.
(2) Interestingly, mudcrab biomass peaked up north where predatory fishes were less abundant.
(3) And the abundance of large, market size oysters was highest where predatory fish were most abundant (GA/SC).
(4) Amazingly, we all did a good job selecting oyster reefs with equivalent salinities (this can vary a lot just within one estuary) and temperature was the same across all of our sites until December….instrumentation up north got covered in ice! Glad I was assigned the relatively tropical reefs in Florida. Finally, oyster recruitment in NC and Florida appears to proceed at a trickle while that of GA/SC is a flood-like situation during the summer.
A month after first being deployed, Tanya and Hanna inspect an Alligator Harbor tile. You can see that some of the oysters have definitely started growing, but also that some of the spat became unglued. When they run the experiment again, they'll use a different adhesive more suitable for a marine environment.
After we all soaked that in, we then talked about the tile experiment. While these data were really cool (mortality presumably due to mudcrabs was lowest where predatory fish were most abundant = GA), we worried about being able to tease apart the effects of flow, sedimentation, and predation. Unfortunately, this experiment seems to uphold my record with experiments: they never work the first time. We’ll probably repeat this in fall of 2011 with a much better design to account for flow and sedimentation.
Before breaking for a nice communal dinner at my place, Mike summarized the nutrient cycling (sediment) data that we have been collecting. In short, having lots of living oysters really promotes de-nitrification processes and our sampling picked this up.
Putting this all together, it looks like there are latitudinal patterns in fish predators that may result in mudcrab density and size patterns. Together, these may help account for latitudinal patterns in oysters (highest in GA). This all matters because more oysters = more denitrification = healthier estuarine waters.
END DAY 1
On day 2 of the summit, we worked through what made us happy about the monitoring data, what things we could add on to make us happier, and that we should continue this monitoring through the summer of 2011. This actually took all morning.
On day 2, the oyster summit moved into the more comfortable location of the Marine Lab guest house.
After a quick lunch break, we then reconvened in another room with a better view (nice to change up the scenery) to go over how we should experimentally test the linkages I mentioned above. This is where the saw blade of productivity met a strong wood knot. Personally, I became horribly confused, fatigued and was utterly useless. This resulted in lots of disagreement on how to proceed and possibly a few ruffled feathers. But nothing that some good food and NFL playoff football couldn’t cure.
After taking in a beautiful winter sunset over the waters off the lab, we ditched the work and began rehashing old and funny stories about each other.
Amazingly, we awoke the next morning and fashioned together a great experimental design that we will implement beginning June 2011. To Jeb’s disappointment, this will not involve large sharks, but we will get to play with catfish!
But now it’s time to prepare for our winter fish and crab sampling. It will be interesting to see what uses these reefs during the dark and cold of winter!
Thanks for following us during 2010, and please stick around for 2011 as I’m sure things will get really interesting as we prepare for our large field experiment.
David’s research is funded by the National Science Foundation.
In keeping with all of the other end-of-year top 10 lists, I’ll wrap up 2010 with my own observations and highlights from In the Grass –
10. No tarballs – yet??
The over-riding event of the 2010 research season was undoubtedly the Deepwater Horizon oil spill. (In fact, that was the impetus for the start of this blog!) Early in the summer, I thought our marsh field sites in St. Joseph Bay were doomed to be covered in oil. I am very relieved to say that is not the case – there are no visible signs of oil at our sites. It’s too soon to say we’re in the clear, because there is still a lot of oil that is unaccounted for, and there could certainly be “invisible” traces only detectable by laboratory analyses. However, we’re in much better shape than I would have predicted back when this all began, and that’s as good a way as any to start a new year!
Members of Team Hughes surveying the marsh.
9. It takes a lot of people to conduct scientific research.
I had a lot of help over the course of the last year – Team Hughes consisted of (in no particular order) Robyn Zerebecki, Ryan Corley, Emily Field, Althea Moore, Liz Hibner, Kristin Berger, Michele Sosa, Prathyusha Pamidi, and AJ Gelin, and we often enlisted members of Team Kimbro as well.
But even that list does not really represent all of the many people who help to get the work done. There are friends and family (thanks, Mom!) that get roped into helping when no one else is available. In addition, there’s an entire staff here at the FSU Coastal and Marine Lab who see to it that we have all the necessary paperwork complete, decks and tables for our experiments at the lab, seawater flowing to our tanks, irrigation systems in the greenhouse, boats and vehicles to get to our sites, and any number of other odd requests that we come up with. They don’t get nearly enough recognition for the critical role that they play!
8. It’s not as scary as I thought to have a camera documenting my every move in the field.
Field work is neither glamorous nor graceful, so I was a bit worried when we started this blog about having goof-ups documented on video. Thanks to the great work of Rob and his team, it’s actually been quite fun! I hardly even notice their presence when we’re in the field, and I love having so many good photos of critters and field sites, since I’m notoriously bad about taking pictures. Most importantly from my perspective, Rob has a great eye for what is important to include (the science, and the people and process behind the science) and what is not (my team and me clumsily getting out of our kayaks, which never fails to look silly!).
Lightning whelks grace many of the habitats studied by Randall and David.
7. Marine plants and invertebrates are really cool.
Ok, this observation has nothing in particular to do with 2010, but I have to put in a plug for the amazing critters that don’t immediately come to mind when you think of charismatic marine animals. I’m talking snails, crown conchs, fiddler crabs, sea hares – all the little guys – and the habitats they live in – salt marshes, seagrass beds, and oyster reefs. Even nondescript sand bars are amazing. I was out last week with Cristina, a visiting researcher in David’s lab, on a sand bar near FSUCML. We found all sorts of large predatory snails (horse conchs, tulip snails, lightning whelks) as well as tons of sand dollars, clams, and worms. Just walking around, looking at, and counting these critters made for one of my most fun field excursions in recent memory. (It didn’t hurt that it wasn’t freezing cold.)
6. Sometimes things are hiding in plain sight.
When Dr. Ed Proffitt visited in the fall, I told him that I thought I may be able to find a spot in St. Joe Bay with 1 or 2 black mangroves for us to look at. Turns out, it’s harder to find a spot that does NOT have 1 or 2 black mangroves! I’m really interested to follow their abundance over the next few years to learn more about their response to climate change and their potential impacts on salt marsh systems in this region.
5. Going out on the reef is pretty fun, too.
Though I spend most of my time in the salt marsh, it was fun to return to oyster reefs this fall to collaborate with David, his team, and our more distant collaborators. A lot of the more mobile animal species in the marsh are also found on the reef (crown conchs, blue crabs), which is a reminder that we shouldn’t treat these different habitats in isolation of one another.
Snails climbing on cordgrass reproductive stems in the field.
4. Snails are more complicated than you think.
It seems pretty straightforward – periwinkle snails climb on cordgrass to escape their predators and consume dead leaves / stems. Except that sometimes they prefer to climb on plants that they apparently don’t eat. And sometimes they create razor-like cuts in live cordgrass and graze the fungus that colonizes the resulting scar. And sometimes they climb up the plant but don’t eat anything, waiting instead until the water retreats and they can return to the sediment surface to consume plant litter…
On a related note, for Christmas my parents gave me the wonderful book The Sound of a Wild Snail Eating. The author, Elisabeth Tova Bailey, provides a compelling account of the delightfulness and intrigue of snails.
Grasshopper grazing damage on a cordgrass stem
3. Grasshoppers eat a lot.
Snails are really abundant in the marsh, and because they don’t move very quickly, it’s impossible not to notice them and wonder about their effects. However, there’s a whole suite of bugs that don’t stay put long enough to be counted as easily (unless of course you suck them into a bug vacuum or catch them in a sweep net), grasshoppers being key among them. Our tank experiments show that the grasshoppers can consume lots of living plant material in a short period of time, serving as a useful reminder that I should wonder about the things I don’t see as much as those I do see.
2. It’s fun to do science with friends.
A recent study indicated that scientific collaborations have a greater impact if the researchers work in close physical proximity to one another. I don’t doubt the results – who doesn’t find it easier to reach a consensus in person than over a Skype conference call? However, I’m happy to be working with David, Jon, Jeb, and Mike “on the reef” despite the geographic distance. Not only are they the right people in terms of research expertise, but our shared history makes it easier to communicate (including to give each other a hard time!).
Rainbow over St. Joe Bay on Christmas Day 2010 (photo credit: L. Hughes)
1. Did I mention that my research sites are not covered in oil? Hooray!
Best wishes in 2011!
Randall’s research is funded by the National Science Foundation.